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java.lang.Object | +--pal.substmodel.RateMatrixUtils
Constructor Summary | |
RateMatrixUtils()
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Method Summary | |
static RateMatrix[] |
getCopy(RateMatrix[] toCopy)
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static RateMatrix |
getInstance(int typeID,
int modelID,
double[] params,
double[] freq)
Create rate matrix given model and data type codes |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
public RateMatrixUtils()
Method Detail |
public static RateMatrix getInstance(int typeID, int modelID, double[] params, double[] freq)
typeID
- code for data typemodelID
- code for model of substitutionparams
- model parametersfreq
- model frequenciespublic static final RateMatrix[] getCopy(RateMatrix[] toCopy)
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