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Describes a device for translating Nucleotide triplets or codon indices into amino acid codes
Method Summary | |
char |
getAminoAcidChar(char[] codon)
Returns the char associated with AminoAcid represented by 'codon' |
char |
getAminoAcidCharFromCodonIndex(int codonIndex)
Returns the amino acid char at the corresponding codonIndex |
int |
getAminoAcidState(char[] codon)
Returns the state associated with AminoAcid represented by 'codon' |
int |
getAminoAcidStateFromCodonIndex(int codonIndex)
Returns the amino acid state at the corresponding codonIndex |
char[][] |
getCodonsFromAminoAcidChar(char aminoAcidChar)
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char[][] |
getCodonsFromAminoAcidState(int aminoAcidState)
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int |
getNumberOfTerminatorIndexes()
Returns the number of terminator amino acids. |
int[] |
getTerminatorIndexes()
Returns the codon indexes of terminator amino acids. |
Method Detail |
public char getAminoAcidChar(char[] codon)
AminoAcids
public int getAminoAcidState(char[] codon)
AminoAcids
public char[][] getCodonsFromAminoAcidState(int aminoAcidState)
public char[][] getCodonsFromAminoAcidChar(char aminoAcidChar)
public char getAminoAcidCharFromCodonIndex(int codonIndex)
public int getAminoAcidStateFromCodonIndex(int codonIndex)
public int[] getTerminatorIndexes()
public int getNumberOfTerminatorIndexes()
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